SNP Detail For rs6721345
1.Mapping Information
Human SNP ID rs6721345
Human chromosome chr2
Human SNP position 241073314
Pig chromosome chr15
Pig SNP position 154982081
2.Annotation Information
PubMed ID22675492
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22675492
StudyGenome-wide association study of circulating estradiol, testosterone, and sex hormone-binding globulin in postmenopausal women.
Disease/TraitSex hormone-binding globulin levels
Initial sample1,598 European ancestry female individuals
Replication sampleNA
Region2q37.3
Chromosome idchr2
Chromosome position241073314
Reported geneSNED1, MTERFD2
Mapped geneSNED1
Upstream gene id
Downstream gene id
SNP gene ids25992
Upstream gene distance
Downstream gene distance
SNP risk allelers6721345-A
SNPsrs6721345
Merged0
SNP id current6721345
Contextmissense_variant
Intergenic0
Allele frequency0.01
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta1.13
%95 Ci[NR] unit increase
PlatformIllumina [~ 2500000] (imputed)
CNVN
Mapped traitsex hormone globulin binding measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004696
Study accessionGCST001554