SNP Detail For rs6720763
1.Mapping Information
Human SNP ID rs6720763
Human chromosome chr2
Human SNP position 167135776
Pig chromosome chr15
Pig SNP position 82491585
2.Annotation Information
PubMed ID25865352
JournalJ Allergy Clin Immunol
Linkwww.ncbi.nlm.nih.gov/pubmed/25865352
StudyA genome-wide association study reveals 2 new susceptibility loci for atopic dermatitis.
Disease/TraitAtopic dermatitis
Initial sample870 European ancestry cases, 5,293 European ancestry controls
Replication sample1,383 European ancestry cases, 1,728 European ancestry controls
Region2q24.3
Chromosome idchr2
Chromosome position167135776
Reported geneXIRP2
Mapped geneXIRP2-AS1, XIRP2
Upstream gene id
Downstream gene id
SNP gene ids100874011, 129446
Upstream gene distance
Downstream gene distance
SNP risk allelers6720763-C
SNPsrs6720763
Merged0
SNP id current6720763
Contextintron_variant
Intergenic0
Allele frequency0.18
P value0.00000004
Pvalue mlog7.39794000867203
P value text
Or beta1.29
%95 Ci[NR]
PlatformAffymetrix [1623390] (imputed)
CNVN
Mapped traitatopic eczema
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000274
Study accessionGCST002844