Human SNP ID | rs6720763 |
---|---|
Human chromosome | chr2 |
Human SNP position | 167135776 |
Pig chromosome | chr15 |
Pig SNP position | 82491585 |
PubMed ID | 25865352 |
---|---|
Journal | J Allergy Clin Immunol |
Link | www.ncbi.nlm.nih.gov/pubmed/25865352 |
Study | A genome-wide association study reveals 2 new susceptibility loci for atopic dermatitis. |
Disease/Trait | Atopic dermatitis |
Initial sample | 870 European ancestry cases, 5,293 European ancestry controls |
Replication sample | 1,383 European ancestry cases, 1,728 European ancestry controls |
Region | 2q24.3 |
Chromosome id | chr2 |
Chromosome position | 167135776 |
Reported gene | XIRP2 |
Mapped gene | XIRP2-AS1, XIRP2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100874011, 129446 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6720763-C |
SNPs | rs6720763 |
Merged | 0 |
SNP id current | 6720763 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.18 |
P value | 0.00000004 |
Pvalue mlog | 7.39794000867203 |
P value text | |
Or beta | 1.29 |
%95 Ci | [NR] |
Platform | Affymetrix [1623390] (imputed) |
CNV | N |
Mapped trait | atopic eczema |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000274 |
Study accession | GCST002844 |