SNP Detail For rs6712720
1.Mapping Information
Human SNP ID rs6712720
Human chromosome chr2
Human SNP position 60054473
Pig chromosome chr3
Pig SNP position 85729035
2.Annotation Information
PubMed ID21493818
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21493818
StudyGenetic and clinical correlates of early-outgrowth colony-forming units.
Disease/TraitMonocyte early outgrowth colony forming units
Initial sample1,654 European ancestry individuals
Replication sampleNA
Region2p16.1
Chromosome idchr2
Chromosome position60054473
Reported geneBCL11A
Mapped geneLOC105374754 - LOC105374755
Upstream gene id105374754
Downstream gene id105374755
SNP gene ids
Upstream gene distance666124
Downstream gene distance210445
SNP risk allelers6712720-C
SNPsrs6712720
Merged0
SNP id current6712720
Contextintron_variant
Intergenic1
Allele frequency0.49
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.16
%95 Ci[0.08-0.24] unit increase
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traitmonocyte early outgrowth colony forming unit
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004506
Study accessionGCST001048