Human SNP ID | rs6712720 |
---|---|
Human chromosome | chr2 |
Human SNP position | 60054473 |
Pig chromosome | chr3 |
Pig SNP position | 85729035 |
PubMed ID | 21493818 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21493818 |
Study | Genetic and clinical correlates of early-outgrowth colony-forming units. |
Disease/Trait | Monocyte early outgrowth colony forming units |
Initial sample | 1,654 European ancestry individuals |
Replication sample | NA |
Region | 2p16.1 |
Chromosome id | chr2 |
Chromosome position | 60054473 |
Reported gene | BCL11A |
Mapped gene | LOC105374754 - LOC105374755 |
Upstream gene id | 105374754 |
Downstream gene id | 105374755 |
SNP gene ids | |
Upstream gene distance | 666124 |
Downstream gene distance | 210445 |
SNP risk allele | rs6712720-C |
SNPs | rs6712720 |
Merged | 0 |
SNP id current | 6712720 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.49 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.16 |
%95 Ci | [0.08-0.24] unit increase |
Platform | Affymetrix [~ 2500000] (imputed) |
CNV | N |
Mapped trait | monocyte early outgrowth colony forming unit |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004506 |
Study accession | GCST001048 |