Human SNP ID | rs67072384 |
---|---|
Human chromosome | chr11 |
Human SNP position | 72739679 |
Pig chromosome | chr9 |
Pig SNP position | 8050166 |
PubMed ID | 25670933 |
---|---|
Journal | Transfus Med Hemother |
Link | www.ncbi.nlm.nih.gov/pubmed/25670933 |
Study | A Genome-Wide Screen for Large-Effect Alloimmunization Susceptibility Loci among Red Blood Cell Transfusion Recipients with Sickle Cell Disease. |
Disease/Trait | Alloimmunization response to red blood cell transfusion in sickle cell anemia |
Initial sample | 48 African American responder cases, 46 African American non-responder cases |
Replication sample | NA |
Region | 11q13.4 |
Chromosome id | chr11 |
Chromosome position | 72739679 |
Reported gene | ARAP1, STARD10 |
Mapped gene | ARAP1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 116985 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs67072384-T |
SNPs | rs67072384 |
Merged | 0 |
SNP id current | 67072384 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.11 |
P value | 0.0000007 |
Pvalue mlog | 6.15490195998574 |
P value text | |
Or beta | 6.22 |
%95 Ci | [NR] |
Platform | Illumina [1008655] |
CNV | N |
Mapped trait | Sickle cell anemia, alloimmunization, response to red blood cell transfusion |
Mapped trait URI | http://www.orpha.net/ORDO/Orphanet_232, http://www.ebi.ac.uk/efo/EFO_0006804, http://www.ebi.ac.uk/efo/EFO_0006802 |
Study accession | GCST002691 |