SNP Detail For rs6704255
1.Mapping Information
Human SNP ID rs6704255
Human chromosome chr1
Human SNP position 218444201
Pig chromosome chr10
Pig SNP position 10515134
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region1q41
Chromosome idchr1
Chromosome position218444201
Reported geneTGFB2
Mapped geneTGFB2
Upstream gene id
Downstream gene id
SNP gene ids7042
Upstream gene distance
Downstream gene distance
SNP risk allelers6704255-A
SNPsrs6704255
Merged0
SNP id current6704255
Context3_prime_UTR_variant
Intergenic0
Allele frequency0.311
P value0.0000005
Pvalue mlog6.30102999566398
P value text
Or beta0.01
%95 Ciunit increase
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264