SNP Detail For rs6695223
1.Mapping Information
Human SNP ID rs6695223
Human chromosome chr1
Human SNP position 85066028
Pig chromosome chr4
Pig SNP position 143406320
2.Annotation Information
PubMed ID23509962
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23509962
StudyA genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis.
Disease/TraitVenous thromboembolism (SNP x SNP interaction)
Initial sample411 European ancestry cases, 1,228 European ancestry controls
Replication sample1,542 European ancestry cases, 1,110 European ancestry controls
Region1p22.3 x 6q23.2
Chromosome idchr1 x 6
Chromosome position85066028 x 134236069
Reported geneNR x NR
Mapped geneWDR63 x SGK1
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers6695223-C x rs1763510-T
SNPsrs6695223 x rs1763510
Merged0
SNP id current
Contextintron_variant x intron_variant
Intergenic
Allele frequency
P value0.000000005
Pvalue mlog8.30102999566398
P value text
Or beta1.86
%95 Ci[NR]
PlatformIllumina [291872]
CNVN
Mapped traitvenous thromboembolism
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004286
Study accessionGCST001913