Human SNP ID | rs6683419 |
---|---|
Human chromosome | chr1 |
Human SNP position | 19501286 |
Pig chromosome | chr6 |
Pig SNP position | 71998151 |
PubMed ID | 24852370 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24852370 |
Study | Genome-wide association study identifies a novel susceptibility gene for serum TSH levels in Chinese populations. |
Disease/Trait | Serum thyroid-stimulating hormone levels |
Initial sample | 1,346 Han Chinese ancestry individuals |
Replication sample | 3,235 She Chinese ancestry individuals |
Region | 1p36.13 |
Chromosome id | chr1 |
Chromosome position | 19501286 |
Reported gene | MINOS1, NBL1, CAPZB |
Mapped gene | LOC105376819 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105376819 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6683419-G |
SNPs | rs6683419 |
Merged | 0 |
SNP id current | 6683419 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.265 |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | |
Or beta | 0.027 |
%95 Ci | [NR] unit increase |
Platform | Illumina [8503852] (imputed) |
CNV | N |
Mapped trait | thyroid stimulating hormone measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004748 |
Study accession | GCST002458 |