SNP Detail For rs6683225
1.Mapping Information
Human SNP ID rs6683225
Human chromosome chr1
Human SNP position 237186438
Pig chromosome chr14
Pig SNP position 58238369
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region1q43
Chromosome idchr1
Chromosome position237186438
Reported geneRYR2
Mapped geneRYR2
Upstream gene id
Downstream gene id
SNP gene ids6262
Upstream gene distance
Downstream gene distance
SNP risk allelers6683225-G
SNPsrs6683225
Merged0
SNP id current6683225
Contextintron_variant
Intergenic0
Allele frequency0.433
P value0.000002
Pvalue mlog5.69897000433601
P value text(Cystathionine )
Or beta0.03
%95 Ci[NR] 碌mol/L increase
PlatformIllumina [899892]
CNVN
Mapped traitamino acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005134
Study accessionGCST001762