Human SNP ID | rs6670655 |
---|---|
Human chromosome | chr1 |
Human SNP position | 164769934 |
Pig chromosome | chr4 |
Pig SNP position | 93655293 |
PubMed ID | 20966902 |
---|---|
Journal | Obesity (Silver Spring) |
Link | www.ncbi.nlm.nih.gov/pubmed/20966902 |
Study | Genome-wide association study of anthropometric traits and evidence of interactions with age and study year in Filipino women. |
Disease/Trait | Height |
Initial sample | 1,792 Filipino ancestry females |
Replication sample | NA |
Region | 1q23.3 |
Chromosome id | chr1 |
Chromosome position | 164769934 |
Reported gene | PBX1 |
Mapped gene | PBX1, LOC100505795 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5087, 100505795 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6670655-T |
SNPs | rs6670655 |
Merged | 0 |
SNP id current | 6670655 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.18 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 1.26 |
%95 Ci | [0.74-1.78] cm increase |
Platform | Affymetrix [2073674] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000839 |