SNP Detail For rs6670655
1.Mapping Information
Human SNP ID rs6670655
Human chromosome chr1
Human SNP position 164769934
Pig chromosome chr4
Pig SNP position 93655293
2.Annotation Information
PubMed ID20966902
JournalObesity (Silver Spring)
Linkwww.ncbi.nlm.nih.gov/pubmed/20966902
StudyGenome-wide association study of anthropometric traits and evidence of interactions with age and study year in Filipino women.
Disease/TraitHeight
Initial sample1,792 Filipino ancestry females
Replication sampleNA
Region1q23.3
Chromosome idchr1
Chromosome position164769934
Reported genePBX1
Mapped genePBX1, LOC100505795
Upstream gene id
Downstream gene id
SNP gene ids5087, 100505795
Upstream gene distance
Downstream gene distance
SNP risk allelers6670655-T
SNPsrs6670655
Merged0
SNP id current6670655
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.18
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta1.26
%95 Ci[0.74-1.78] cm increase
PlatformAffymetrix [2073674] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST000839