Human SNP ID | rs6665019 |
---|---|
Human chromosome | chr1 |
Human SNP position | 25001518 |
Pig chromosome | chr6 |
Pig SNP position | 76362692 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Dementia and core Alzheimer__s disease neuropathologic changes |
Initial sample | up to 3,887 cases, up to 1,027 controls |
Replication sample | NA |
Region | 1p36.11 |
Chromosome id | chr1 |
Chromosome position | 25001518 |
Reported gene | intergenic |
Mapped gene | RUNX3 - MIR4425 |
Upstream gene id | 864 |
Downstream gene id | 100616365 |
SNP gene ids | |
Upstream gene distance | 36361 |
Downstream gene distance | 21985 |
SNP risk allele | rs6665019-A |
SNPs | rs6665019 |
Merged | 0 |
SNP id current | 6665019 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.1211 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (Complete) |
Or beta | 0.5008 |
%95 Ci | [0.29-0.72] unit decrease |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | dementia, Alzheimer__s disease neuropathologic change |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003862, http://www.ebi.ac.uk/efo/EFO_0006801 |
Study accession | GCST002593 |