SNP Detail For rs666088
1.Mapping Information
Human SNP ID rs666088
Human chromosome chr4
Human SNP position 20493512
Pig chromosome chr8
Pig SNP position 15259065
2.Annotation Information
PubMed ID17903301
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/17903301
StudyGenome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study.
Disease/TraitEchocardiographic traits
Initial sampleUp to 1,238 European ancestry individuals
Replication sampleNA
Region4p15.31
Chromosome idchr4
Chromosome position20493512
Reported geneSLIT2
Mapped geneSLIT2
Upstream gene id
Downstream gene id
SNP gene ids9353
Upstream gene distance
Downstream gene distance
SNP risk allelers666088-?
SNPsrs666088
Merged0
SNP id current666088
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text(LVDD)
Or beta
%95 Ci
PlatformAffymetrix [70897]
CNVN
Mapped traitcardiovascular measurement, left ventricular function
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004298, http://www.ebi.ac.uk/efo/EFO_0004295
Study accessionGCST000110