Human SNP ID | rs664154 |
---|---|
Human chromosome | chr6 |
Human SNP position | 18991328 |
Pig chromosome | chr7 |
Pig SNP position | 15523819 |
PubMed ID | 25869804 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/25869804 |
Study | GWAS for executive function and processing speed suggests involvement of the CADM2 gene. |
Disease/Trait | Information processing speed |
Initial sample | Up to 30,807 European ancestry individuals, up to 1,267 Erasmus Rucphen Family individuals, up to 535 Korkulan individuals, up to 417 Orcadian individuals, up to 311 Vis individuals |
Replication sample | Up to 8,436 European ancestry individuals, up to 1,444 African American individuals |
Region | 6p22.3 |
Chromosome id | chr6 |
Chromosome position | 18991328 |
Reported gene | RP1-239K6.1 |
Mapped gene | LOC105374958 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105374958 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs664154-A |
SNPs | rs664154 |
Merged | 0 |
SNP id current | 664154 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.24 |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | (LDST/DSST - age and sex adjusted) |
Or beta | 5.03 |
%95 Ci | [NR] unit increase |
Platform | Affymetrix, Illumina [up to 2357391] (imputed) |
CNV | N |
Mapped trait | information processing speed |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004363 |
Study accession | GCST002850 |