Human SNP ID | rs6601306 |
---|---|
Human chromosome | chr8 |
Human SNP position | 9407201 |
Pig chromosome | chr15 |
Pig SNP position | 63209907 |
PubMed ID | 24792382 |
---|---|
Journal | Clin Chim Acta |
Link | www.ncbi.nlm.nih.gov/pubmed/24792382 |
Study | Genome-wide association study identifies ALLC polymorphisms correlated with FEV₁ change by corticosteroid. |
Disease/Trait | Response to inhaled corticosteroid treatment in asthma (percentage change of FEV1) |
Initial sample | 189 Korean ancestry cases |
Replication sample | NA |
Region | 8p23.1 |
Chromosome id | chr8 |
Chromosome position | 9407201 |
Reported gene | TNKS |
Mapped gene | LOC105379229, LOC105379231 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105379229, 105379231 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6601306-? |
SNPs | rs6601306 |
Merged | 0 |
SNP id current | 6601306 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.338 |
%95 Ci | [NR] unit increase |
Platform | Illumina [430487] |
CNV | N |
Mapped trait | FEV change measurement, response to corticosteroid, asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005921, http://purl.obolibrary.org/obo/GO_0031960, http://www.ebi.ac.uk/efo/EFO_0000270 |
Study accession | GCST002432 |