SNP Detail For rs6601306
1.Mapping Information
Human SNP ID rs6601306
Human chromosome chr8
Human SNP position 9407201
Pig chromosome chr15
Pig SNP position 63209907
2.Annotation Information
PubMed ID24792382
JournalClin Chim Acta
Linkwww.ncbi.nlm.nih.gov/pubmed/24792382
StudyGenome-wide association study identifies ALLC polymorphisms correlated with FEV₁ change by corticosteroid.
Disease/TraitResponse to inhaled corticosteroid treatment in asthma (percentage change of FEV1)
Initial sample189 Korean ancestry cases
Replication sampleNA
Region8p23.1
Chromosome idchr8
Chromosome position9407201
Reported geneTNKS
Mapped geneLOC105379229, LOC105379231
Upstream gene id
Downstream gene id
SNP gene ids105379229, 105379231
Upstream gene distance
Downstream gene distance
SNP risk allelers6601306-?
SNPsrs6601306
Merged0
SNP id current6601306
Contextintron_variant
Intergenic0
Allele frequency
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.338
%95 Ci[NR] unit increase
PlatformIllumina [430487]
CNVN
Mapped traitFEV change measurement, response to corticosteroid, asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005921, http://purl.obolibrary.org/obo/GO_0031960, http://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST002432