Human SNP ID | rs6598541 |
---|---|
Human chromosome | chr15 |
Human SNP position | 98727906 |
Pig chromosome | chr1 |
Pig SNP position | 153754334 |
PubMed ID | 23263486 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23263486 |
Study | Genome-wide association analyses identify 18 new loci associated with serum urate concentrations. |
Disease/Trait | Urate levels |
Initial sample | 49,825 European ancestry males, 60,522 European ancestry females |
Replication sample | Up to 32,813 European ancestry individuals |
Region | 15q26.3 |
Chromosome id | chr15 |
Chromosome position | 98727906 |
Reported gene | IGF1R |
Mapped gene | IGF1R |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3480 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6598541-A |
SNPs | rs6598541 |
Merged | 0 |
SNP id current | 6598541 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.36 |
P value | 0.000000000000005 |
Pvalue mlog | 14.3010299956639 |
P value text | |
Or beta | 0.043 |
%95 Ci | [0.031-0.055] mg/dl increase |
Platform | Affymetrix, Illumina, Perlegen [2450547] (imputed) |
CNV | N |
Mapped trait | urate measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004531 |
Study accession | GCST001791 |