SNP Detail For rs6598541
1.Mapping Information
Human SNP ID rs6598541
Human chromosome chr15
Human SNP position 98727906
Pig chromosome chr1
Pig SNP position 153754334
2.Annotation Information
PubMed ID23263486
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23263486
StudyGenome-wide association analyses identify 18 new loci associated with serum urate concentrations.
Disease/TraitUrate levels
Initial sample49,825 European ancestry males, 60,522 European ancestry females
Replication sampleUp to 32,813 European ancestry individuals
Region15q26.3
Chromosome idchr15
Chromosome position98727906
Reported geneIGF1R
Mapped geneIGF1R
Upstream gene id
Downstream gene id
SNP gene ids3480
Upstream gene distance
Downstream gene distance
SNP risk allelers6598541-A
SNPsrs6598541
Merged0
SNP id current6598541
Contextintron_variant
Intergenic0
Allele frequency0.36
P value0.000000000000005
Pvalue mlog14.3010299956639
P value text
Or beta0.043
%95 Ci[0.031-0.055] mg/dl increase
PlatformAffymetrix, Illumina, Perlegen [2450547] (imputed)
CNVN
Mapped traiturate measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004531
Study accessionGCST001791