Human SNP ID | rs6598163 |
---|---|
Human chromosome | chr12 |
Human SNP position | 131840694 |
Pig chromosome | chr14 |
Pig SNP position | 24959688 |
PubMed ID | 22683712 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22683712 |
Study | Genome-wide association analysis identifies susceptibility loci for migraine without aura. |
Disease/Trait | Migraine |
Initial sample | 2,326 European ancestry cases, 4,580 European ancestry controls |
Replication sample | 2,508 European ancestry cases, 2,652 European ancestry controls |
Region | 12q24.33 |
Chromosome id | chr12 |
Chromosome position | 131840694 |
Reported gene | MMP17 |
Mapped gene | MMP17 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4326 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6598163-G |
SNPs | rs6598163 |
Merged | 0 |
SNP id current | 6598163 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | 0.48 |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | |
Or beta | 1.15 |
%95 Ci | [1.09-1.21] |
Platform | Illumina [1246388] (imputed) |
CNV | N |
Mapped trait | migraine disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003821 |
Study accession | GCST001563 |