SNP Detail For rs6593122
1.Mapping Information
Human SNP ID rs6593122
Human chromosome chr7
Human SNP position 54114239
Pig chromosome chr9
Pig SNP position 152259603
2.Annotation Information
PubMed ID21396408
JournalVaccine
Linkwww.ncbi.nlm.nih.gov/pubmed/21396408
StudyAtopy history and the genomics of wheezing after influenza vaccination in children 6-59 months of age.
Disease/TraitVaccine-related adverse events
Initial sample6 European ancestry cases,55 European ancestry controls
Replication sampleNA
Region7p11.2
Chromosome idchr7
Chromosome position54114239
Reported geneintergenic
Mapped geneLOC102723574 - HPVC1
Upstream gene id102723574
Downstream gene id3262
SNP gene ids
Upstream gene distance250721
Downstream gene distance86985
SNP risk allelers6593122-?
SNPsrs6593122
Merged0
SNP id current6593122
Contextintergenic_variant
Intergenic1
Allele frequency0.11
P value0.000004
Pvalue mlog5.39794000867203
P value text(influenza)
Or beta
%95 Ci
PlatformIllumina [468458]
CNVN
Mapped traitresponse to vaccine
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645
Study accessionGCST001016