SNP Detail For rs6591182
1.Mapping Information
Human SNP ID rs6591182
Human chromosome chr11
Human SNP position 65582285
Pig chromosome chr2
Pig SNP position 5871107
2.Annotation Information
PubMed ID20708005
JournalGastroenterology
Linkwww.ncbi.nlm.nih.gov/pubmed/20708005
StudyGenome-wide association study identifies variants associated with histologic features of nonalcoholic Fatty liver disease.
Disease/TraitNon-alcoholic fatty liver disease histology (lobular)
Initial sample236 European ancestry cases
Replication sampleNA
Region11q13.1
Chromosome idchr11
Chromosome position65582285
Reported geneLTBP3, EHBP1L1
Mapped geneEHBP1L1
Upstream gene id
Downstream gene id
SNP gene ids254102
Upstream gene distance
Downstream gene distance
SNP risk allelers6591182-A
SNPsrs6591182
Merged0
SNP id current6591182
Contextmissense_variant
Intergenic0
Allele frequency0.47
P value0.0000009
Pvalue mlog6.04575749056067
P value text
Or beta0.54
%95 Ci[NR] unit increase
PlatformIllumina [324623]
CNVN
Mapped traitnon-alcoholic fatty liver disease, cirrhosis of liver
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003095, http://www.ebi.ac.uk/efo/EFO_0001422
Study accessionGCST000766