Human SNP ID | rs6580083 |
---|---|
Human chromosome | chr5 |
Human SNP position | 154486169 |
Pig chromosome | chr16 |
Pig SNP position | 74580762 |
PubMed ID | 25035420 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25035420 |
Study | Identification of three novel genetic variations associated with electrocardiographic traits (QRS duration and PR interval) in East Asians. |
Disease/Trait | QRS duration |
Initial sample | 6,085 Korean ancestry individuals |
Replication sample | 7,295 Japanese ancestry individuals |
Region | 5q33.2 |
Chromosome id | chr5 |
Chromosome position | 154486169 |
Reported gene | HAND1, SAP30L |
Mapped gene | HAND1 - CIR1P1 |
Upstream gene id | 9421 |
Downstream gene id | 100131740 |
SNP gene ids | |
Upstream gene distance | 7905 |
Downstream gene distance | 73146 |
SNP risk allele | rs6580083-G |
SNPs | rs6580083 |
Merged | 0 |
SNP id current | 6580083 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.3 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 0.85 |
%95 Ci | [0.50-1.20] unit decrease |
Platform | Affymetrix [2100000] (imputed) |
CNV | N |
Mapped trait | QRS duration |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005055 |
Study accession | GCST002533 |