SNP Detail For rs6576132
1.Mapping Information
Human SNP ID rs6576132
Human chromosome chr14
Human SNP position 28258905
Pig chromosome chr7
Pig SNP position 76182637
2.Annotation Information
PubMed ID24825563
JournalAm J Respir Cell Mol Biol
Linkwww.ncbi.nlm.nih.gov/pubmed/24825563
StudyCommon genetic variants associated with resting oxygenation in chronic obstructive pulmonary disease.
Disease/TraitResting oxygen saturation in chronic osbtructive pulmonary disease (pulse oxymetry)
Initial sample820 African American cases
Replication sample4,568 European ancestry cases
Region14q12
Chromosome idchr14
Chromosome position28258905
Reported geneFOXG1
Mapped geneLOC728755 - BNIP3P1
Upstream gene id728755
Downstream gene id319138
SNP gene ids
Upstream gene distance585684
Downstream gene distance5505
SNP risk allelers6576132-A
SNPsrs6576132
Merged0
SNP id current6576132
Contextintergenic_variant
Intergenic1
Allele frequency0.434
P value0.00000005
Pvalue mlog7.30102999566398
P value text(AA)
Or beta0.004
%95 Ci[0.003-0.005] unit increase
PlatformIllumina [6160662] (imputed)
CNVN
Mapped traitoxygen saturation measurement, chronic obstructive pulmonary disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005682, http://www.ebi.ac.uk/efo/EFO_0000341
Study accessionGCST002447