Human SNP ID | rs6576132 |
---|---|
Human chromosome | chr14 |
Human SNP position | 28258905 |
Pig chromosome | chr7 |
Pig SNP position | 76182637 |
PubMed ID | 24825563 |
---|---|
Journal | Am J Respir Cell Mol Biol |
Link | www.ncbi.nlm.nih.gov/pubmed/24825563 |
Study | Common genetic variants associated with resting oxygenation in chronic obstructive pulmonary disease. |
Disease/Trait | Resting oxygen saturation in chronic osbtructive pulmonary disease (pulse oxymetry) |
Initial sample | 820 African American cases |
Replication sample | 4,568 European ancestry cases |
Region | 14q12 |
Chromosome id | chr14 |
Chromosome position | 28258905 |
Reported gene | FOXG1 |
Mapped gene | LOC728755 - BNIP3P1 |
Upstream gene id | 728755 |
Downstream gene id | 319138 |
SNP gene ids | |
Upstream gene distance | 585684 |
Downstream gene distance | 5505 |
SNP risk allele | rs6576132-A |
SNPs | rs6576132 |
Merged | 0 |
SNP id current | 6576132 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.434 |
P value | 0.00000005 |
Pvalue mlog | 7.30102999566398 |
P value text | (AA) |
Or beta | 0.004 |
%95 Ci | [0.003-0.005] unit increase |
Platform | Illumina [6160662] (imputed) |
CNV | N |
Mapped trait | oxygen saturation measurement, chronic obstructive pulmonary disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005682, http://www.ebi.ac.uk/efo/EFO_0000341 |
Study accession | GCST002447 |