Human SNP ID | rs657452 |
---|---|
Human chromosome | chr1 |
Human SNP position | 49124175 |
Pig chromosome | chr6 |
Pig SNP position | 150106470 |
PubMed ID | 25673413 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 1p33 |
Chromosome id | chr1 |
Chromosome position | 49124175 |
Reported gene | AGBL4 |
Mapped gene | AGBL4, LOC105378706 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84871, 105378706 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs657452-A |
SNPs | rs657452 |
Merged | 0 |
SNP id current | 657452 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.394 |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | (EA, men) |
Or beta | 0.022 |
%95 Ci | [0.013-0.03] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |
PubMed ID | 25673413 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 1p33 |
Chromosome id | chr1 |
Chromosome position | 49124175 |
Reported gene | AGBL4 |
Mapped gene | AGBL4, LOC105378706 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84871, 105378706 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs657452-A |
SNPs | rs657452 |
Merged | 0 |
SNP id current | 657452 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.394 |
P value | 0.00000002 |
Pvalue mlog | 7.69897000433601 |
P value text | (EA, women) |
Or beta | 0.023 |
%95 Ci | [0.015-0.031] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |
PubMed ID | 25673413 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 1p33 |
Chromosome id | chr1 |
Chromosome position | 49124175 |
Reported gene | AGBL4 |
Mapped gene | AGBL4, LOC105378706 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84871, 105378706 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs657452-A |
SNPs | rs657452 |
Merged | 0 |
SNP id current | 657452 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.394 |
P value | 0.0000000000005 |
Pvalue mlog | 12.3010299956639 |
P value text | (EA) |
Or beta | 0.023 |
%95 Ci | [0.017-0.029] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |
PubMed ID | 25673413 |
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25673413 |
Study | Genetic studies of body mass index yield new insights for obesity biology. |
Disease/Trait | Body mass index |
Initial sample | up to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals |
Replication sample | up to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828 |
Region | 1p33 |
Chromosome id | chr1 |
Chromosome position | 49124175 |
Reported gene | AGBL4 |
Mapped gene | AGBL4, LOC105378706 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84871, 105378706 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs657452-A |
SNPs | rs657452 |
Merged | 0 |
SNP id current | 657452 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.397 |
P value | 0.0000000000002 |
Pvalue mlog | 12.698970004336 |
P value text | |
Or beta | 0.023 |
%95 Ci | [0.017-0.029] kg/m2 increase |
Platform | Affymetrix, Illumina [2550021] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST002783 |