SNP Detail For rs6568685
1.Mapping Information
Human SNP ID rs6568685
Human chromosome chr6
Human SNP position 111499910
Pig chromosome chr1
Pig SNP position 86981942
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region6q21
Chromosome idchr6
Chromosome position111499910
Reported geneNR
Mapped geneTRAF3IP2-AS1
Upstream gene id
Downstream gene id
SNP gene ids643749
Upstream gene distance
Downstream gene distance
SNP risk allelers6568685-A
SNPsrs6568685
Merged
SNP id current6568685
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000007
Pvalue mlog6.15490195998574
P value text
Or beta1.07
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048