SNP Detail For rs6568401
1.Mapping Information
Human SNP ID rs6568401
Human chromosome chr6
Human SNP position 105740943
Pig chromosome chr1
Pig SNP position 81343242
2.Annotation Information
PubMed ID23704328
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23704328
StudyGenome-wide association study of primary tooth eruption identifies pleiotropic loci associated with height and craniofacial distances.
Disease/TraitPrimary tooth development (time to first tooth eruption)
Initial sample11,118 European ancestry individuals
Replication sample
Region6q21
Chromosome idchr6
Chromosome position105740943
Reported geneNA
Mapped geneLOC105377923
Upstream gene id
Downstream gene id
SNP gene ids105377923
Upstream gene distance
Downstream gene distance
SNP risk allelers6568401-C
SNPsrs6568401
Merged0
SNP id current6568401
Contextregulatory_region_variant
Intergenic0
Allele frequencyNR
P value0.0000000002
Pvalue mlog9.69897000433601
P value text
Or beta0.19
%95 Ci[0.13-0.25] unit decrease
PlatformIllumina [2446724] (imputed)
CNVN
Mapped traittooth eruption
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0044691
Study accessionGCST002030