Human SNP ID | rs6563943 |
---|---|
Human chromosome | chr16 |
Human SNP position | 83605730 |
Pig chromosome | chr6 |
Pig SNP position | 5361875 |
PubMed ID | 20189936 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20189936 |
Study | A genome-wide association study in 19 633 Japanese subjects identified LHX3-QSOX2 and IGF1 as adult height loci. |
Disease/Trait | Height |
Initial sample | 19,633 Japanese ancestry individuals |
Replication sample | NA |
Region | 16q23.3 |
Chromosome id | chr16 |
Chromosome position | 83605730 |
Reported gene | CDH13 |
Mapped gene | CDH13 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1012 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6563943-A |
SNPs | rs6563943 |
Merged | 0 |
SNP id current | 6563943 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.32 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 0.05 |
%95 Ci | [0.03-0.07] cm increase |
Platform | Illumina [420885] |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000611 |