SNP Detail For rs6563210
1.Mapping Information
Human SNP ID rs6563210
Human chromosome chr13
Human SNP position 35902310
Pig chromosome chr11
Pig SNP position 11898988
2.Annotation Information
PubMed ID21998595
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21998595
StudyIdentification, replication, and fine-mapping of Loci associated with adult height in individuals of african ancestry.
Disease/TraitHeight
Initial sample20,427 African ancestry individuals
Replication sampleUp to 16,436 African American individuals
Region13q13.3
Chromosome idchr13
Chromosome position35902310
Reported geneDCLK1
Mapped geneDCLK1, LOC105370163
Upstream gene id
Downstream gene id
SNP gene ids9201, 105370163
Upstream gene distance
Downstream gene distance
SNP risk allelers6563210-A
SNPsrs6563210
Merged0
SNP id current6563210
Contextintron_variant
Intergenic0
Allele frequency0.56
P value0.0000007
Pvalue mlog6.15490195998574
P value text
Or beta0.039
%95 Ci[0.023-0.055] unit decrease
PlatformAffymetrix, Illumina [3310998] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST001263