SNP Detail For rs6549373
1.Mapping Information
Human SNP ID rs6549373
Human chromosome chr3
Human SNP position 66719460
Pig chromosome chr13
Pig SNP position 52983580
2.Annotation Information
PubMed ID21294900
JournalBMC Med Genomics
Linkwww.ncbi.nlm.nih.gov/pubmed/21294900
StudyA genome-wide association study of serum uric acid in African Americans.
Disease/TraitUric acid levels
Initial sample1,017 African American individuals
Replication sampleNA
Region3p14.1
Chromosome idchr3
Chromosome position66719460
Reported geneRP11-814M22.1
Mapped geneLOC105377142 - LOC105377143
Upstream gene id105377142
Downstream gene id105377143
SNP gene ids
Upstream gene distance1236
Downstream gene distance10918
SNP risk allelers6549373-T
SNPsrs6549373
Merged0
SNP id current6549373
Contextintergenic_variant
Intergenic1
Allele frequency0.06
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.349
%95 Ci[0.21-0.49] unit decrease
PlatformAffymetrix [2366856] (imputed)
CNVN
Mapped traituric acid measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004761
Study accessionGCST000963