Human SNP ID | rs6546886 |
---|---|
Human chromosome | chr2 |
Human SNP position | 74018650 |
Pig chromosome | chr3 |
Pig SNP position | 72148868 |
PubMed ID | 21546767 |
---|---|
Journal | Am J Nephrol |
Link | www.ncbi.nlm.nih.gov/pubmed/21546767 |
Study | Genome-wide association scan for survival on dialysis in African-Americans with type 2 diabetes. |
Disease/Trait | Dialysis-related mortality |
Initial sample | 610 African American type 2 diabetes cases |
Replication sample | NA |
Region | 2p13.1 |
Chromosome id | chr2 |
Chromosome position | 74018650 |
Reported gene | DGUOK, TET3 |
Mapped gene | TET3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 200424 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6546886-? |
SNPs | rs6546886 |
Merged | 0 |
SNP id current | 6546886 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.29 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 2.13 |
%95 Ci | [1.55-2.93] |
Platform | Affymetrix [832357] |
CNV | N |
Mapped trait | chronic kidney disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003884 |
Study accession | GCST001066 |