SNP Detail For rs6540731
1.Mapping Information
Human SNP ID rs6540731
Human chromosome chr1
Human SNP position 212218821
Pig chromosome chr9
Pig SNP position 144192681
2.Annotation Information
PubMed ID23358156
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23358156
StudyChildhood intelligence is heritable, highly polygenic and associated with FNBP1L.
Disease/TraitIntelligence (childhood)
Initial sample12,441 European ancestry children
Replication sample5,548 European ancestry children
Region1q32.3
Chromosome idchr1
Chromosome position212218821
Reported geneNR
Mapped geneLOC101929541
Upstream gene id
Downstream gene id
SNP gene ids101929541
Upstream gene distance
Downstream gene distance
SNP risk allelers6540731-A
SNPsrs6540731
Merged0
SNP id current6540731
Contextregulatory_region_variant
Intergenic0
Allele frequency0.415
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta0.05
%95 Ci[0.028-0.072] unit decrease
PlatformAffymetrix, Illumina [138093] (imputed)
CNVN
Mapped traitintelligence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004337
Study accessionGCST001837