Human SNP ID | rs6539267 |
---|---|
Human chromosome | chr12 |
Human SNP position | 106391776 |
Pig chromosome | chr5 |
Pig SNP position | 14002562 |
PubMed ID | 22889924 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/22889924 |
Study | Genome-wide association study of Tourette__s syndrome. |
Disease/Trait | Tourette syndrome |
Initial sample | 778 European ancestry cases, 4,414 European ancestry controls, 242 Ashkenazi Jewish cases, 354 Ashkenazi Jewish controls, 265 French Canadian founder cases, 196 French Canadian founder controls |
Replication sample | 211 Latin American cases, 285 Latin American controls |
Region | 12q23.3 |
Chromosome id | chr12 |
Chromosome position | 106391776 |
Reported gene | POLR3B, TCP11L2, FLJ45508 |
Mapped gene | POLR3B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 55703 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6539267-T |
SNPs | rs6539267 |
Merged | 0 |
SNP id current | 6539267 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.69 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 1.27 |
%95 Ci | [NR] |
Platform | Illumina [484295] |
CNV | N |
Mapped trait | Tourette syndrome |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004895 |
Study accession | GCST001635 |