Human SNP ID | rs6538761 |
---|---|
Human chromosome | chr12 |
Human SNP position | 97040442 |
Pig chromosome | chr5 |
Pig SNP position | 91083097 |
PubMed ID | 24189344 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/24189344 |
Study | Common genetic variants on 1p13.2 associate with risk of autism. |
Disease/Trait | Autism |
Initial sample | 275 Chinese ancestry cases and 550 Chinese ancestry controls from 275 trios, 136 Chinese ancestry cases, 984 Chinese ancestry controls |
Replication sample | 1,299 European ancestry cases and 2,598 European ancestry controls from 1,299 trios |
Region | 12q23.1 |
Chromosome id | chr12 |
Chromosome position | 97040442 |
Reported gene | NEDD1 |
Mapped gene | LOC105369926 - LOC105369928 |
Upstream gene id | 105369926 |
Downstream gene id | 105369928 |
SNP gene ids | |
Upstream gene distance | 15154 |
Downstream gene distance | 144640 |
SNP risk allele | rs6538761-A |
SNPs | rs6538761 |
Merged | 0 |
SNP id current | 6538761 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 1.24 |
%95 Ci | [NR] |
Platform | Illumina [702234] (imputed) |
CNV | N |
Mapped trait | autism |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003758 |
Study accession | GCST002268 |