SNP Detail For rs6536413
1.Mapping Information
Human SNP ID rs6536413
Human chromosome chr4
Human SNP position 159361566
Pig chromosome chr8
Pig SNP position 50685719
2.Annotation Information
PubMed ID23358156
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/23358156
StudyChildhood intelligence is heritable, highly polygenic and associated with FNBP1L.
Disease/TraitIntelligence (childhood)
Initial sample12,441 European ancestry children
Replication sample5,548 European ancestry children
Region4q32.1
Chromosome idchr4
Chromosome position159361566
Reported geneNR
Mapped geneRAPGEF2 - LOC105377512
Upstream gene id9693
Downstream gene id105377512
SNP gene ids
Upstream gene distance1404
Downstream gene distance1157298
SNP risk allelers6536413-A
SNPsrs6536413
Merged0
SNP id current6536413
Contextdownstream_gene_variant
Intergenic1
Allele frequency0.13
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta0.075
%95 Ci[0.042-0.108] unit decrease
PlatformAffymetrix, Illumina [138093] (imputed)
CNVN
Mapped traitintelligence
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004337
Study accessionGCST001837