Human SNP ID | rs6533014 |
---|---|
Human chromosome | chr4 |
Human SNP position | 102428583 |
Pig chromosome | chr8 |
Pig SNP position | 127872803 |
PubMed ID | 24204828 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/24204828 |
Study | Genome-wide contribution of genotype by environment interaction to variation of diabetes-related traits. |
Disease/Trait | Homeostasis model assessment of beta-cell function (interaction) |
Initial sample | 820 European ancestry individuals |
Replication sample | NA |
Region | 4q24 |
Chromosome id | chr4 |
Chromosome position | 102428583 |
Reported gene | LOC100133085, NFKB1 |
Mapped gene | LOC105377621 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105377621 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6533014-A |
SNPs | rs6533014 |
Merged | 0 |
SNP id current | 6533014 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.479 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (n-6 PUFA) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [590000] |
CNV | N |
Mapped trait | HOMA-B |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004469 |
Study accession | GCST002251 |