Human SNP ID | rs6531209 |
---|---|
Human chromosome | chr2 |
Human SNP position | 20134962 |
Pig chromosome | chr3 |
Pig SNP position | 126028063 |
PubMed ID | 24529757 |
---|---|
Journal | Neurobiol Aging |
Link | www.ncbi.nlm.nih.gov/pubmed/24529757 |
Study | Genome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations. |
Disease/Trait | Amyotrophic lateral sclerosis (sporadic) |
Initial sample | 250 Han Chinese ancestry cases, 250 Han Chinese ancestry controls |
Replication sample | NA |
Region | 2p24.1 |
Chromosome id | chr2 |
Chromosome position | 20134962 |
Reported gene | SDC1 |
Mapped gene | LOC105373463 - RPS16P2 |
Upstream gene id | 105373463 |
Downstream gene id | 402069 |
SNP gene ids | |
Upstream gene distance | 8933 |
Downstream gene distance | 20611 |
SNP risk allele | rs6531209-? |
SNPs | rs6531209 |
Merged | 0 |
SNP id current | 6531209 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [859311] |
CNV | N |
Mapped trait | sporadic amyotrophic lateral sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001357 |
Study accession | GCST002337 |