SNP Detail For rs6531209
1.Mapping Information
Human SNP ID rs6531209
Human chromosome chr2
Human SNP position 20134962
Pig chromosome chr3
Pig SNP position 126028063
2.Annotation Information
PubMed ID24529757
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/24529757
StudyGenome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations.
Disease/TraitAmyotrophic lateral sclerosis (sporadic)
Initial sample250 Han Chinese ancestry cases, 250 Han Chinese ancestry controls
Replication sampleNA
Region2p24.1
Chromosome idchr2
Chromosome position20134962
Reported geneSDC1
Mapped geneLOC105373463 - RPS16P2
Upstream gene id105373463
Downstream gene id402069
SNP gene ids
Upstream gene distance8933
Downstream gene distance20611
SNP risk allelers6531209-?
SNPsrs6531209
Merged0
SNP id current6531209
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci
PlatformIllumina [859311]
CNVN
Mapped traitsporadic amyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001357
Study accessionGCST002337