Human SNP ID | rs6517656 |
---|---|
Human chromosome | chr21 |
Human SNP position | 41211811 |
Pig chromosome | chr13 |
Pig SNP position | 214787719 |
PubMed ID | 23903356 |
---|---|
Journal | Diabetes |
Link | www.ncbi.nlm.nih.gov/pubmed/23903356 |
Study | Identification of HKDC1 and BACE2 as genes influencing glycemic traits during pregnancy through genome-wide association studies. |
Disease/Trait | Glycemic traits (pregnancy) |
Initial sample | 1,367 European ancestry individuals, 817 Hispanic individuals, 1,075 Afro-Caribbean individuals, 1,178 Thai ancestry individuals |
Replication sample | 2,798 European ancestry individuals, 228 French Canadian founder population individuals |
Region | 21q22.3 |
Chromosome id | chr21 |
Chromosome position | 41211811 |
Reported gene | BACE2, PLAC4, C21orf130, FAM3B |
Mapped gene | BACE2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 25825 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6517656-G |
SNPs | rs6517656 |
Merged | 0 |
SNP id current | 6517656 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.839 |
P value | 0.0000000000000006 |
Pvalue mlog | 15.2218487496163 |
P value text | (FCP) |
Or beta | 0.0402 |
%95 Ci | [NR] unit increase |
Platform | Illumina [up to 945994] (imputed) |
CNV | N |
Mapped trait | C-peptide measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005187 |
Study accession | GCST002110 |