SNP Detail For rs6509701
1.Mapping Information
Human SNP ID rs6509701
Human chromosome chr19
Human SNP position 52880932
Pig chromosome chr1
Pig SNP position 309051490
2.Annotation Information
PubMed ID22005930
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22005930
StudyGenome-wide association study of Alzheimer__s disease with psychotic symptoms.
Disease/TraitPsychosis in Alzheimer__s disease
Initial sample1,039 European ancestry cases with psychosis, 610 European ancestry cases without psychosis, 260 European, African American and Native American ancestry cases with psychosis and 125 European, African American and Native American ancestry cases without psy
Replication sampleNA
Region19q13.41
Chromosome idchr19
Chromosome position52880932
Reported geneZNF320
Mapped geneZNF320
Upstream gene id
Downstream gene id
SNP gene ids162967
Upstream gene distance
Downstream gene distance
SNP risk allelers6509701-?
SNPsrs6509701
Merged0
SNP id current6509701
Contextsynonymous_variant
Intergenic0
Allele frequency0.7
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta1.4084507
%95 Ci[NR]
PlatformIllumina [1882172] (imputed)
CNVN
Mapped traitAlzheimers disease, psychotic symptoms
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000249, http://www.ebi.ac.uk/efo/EFO_0005940
Study accessionGCST001282