Human SNP ID | rs6509701 |
---|---|
Human chromosome | chr19 |
Human SNP position | 52880932 |
Pig chromosome | chr1 |
Pig SNP position | 309051490 |
PubMed ID | 22005930 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/22005930 |
Study | Genome-wide association study of Alzheimer__s disease with psychotic symptoms. |
Disease/Trait | Psychosis in Alzheimer__s disease |
Initial sample | 1,039 European ancestry cases with psychosis, 610 European ancestry cases without psychosis, 260 European, African American and Native American ancestry cases with psychosis and 125 European, African American and Native American ancestry cases without psy |
Replication sample | NA |
Region | 19q13.41 |
Chromosome id | chr19 |
Chromosome position | 52880932 |
Reported gene | ZNF320 |
Mapped gene | ZNF320 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 162967 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6509701-? |
SNPs | rs6509701 |
Merged | 0 |
SNP id current | 6509701 |
Context | synonymous_variant |
Intergenic | 0 |
Allele frequency | 0.7 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 1.4084507 |
%95 Ci | [NR] |
Platform | Illumina [1882172] (imputed) |
CNV | N |
Mapped trait | Alzheimers disease, psychotic symptoms |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000249, http://www.ebi.ac.uk/efo/EFO_0005940 |
Study accession | GCST001282 |