SNP Detail For rs650950
1.Mapping Information
Human SNP ID rs650950
Human chromosome chr11
Human SNP position 35517721
Pig chromosome chr2
Pig SNP position 27885286
2.Annotation Information
PubMed ID23897914
JournalPediatrics
Linkwww.ncbi.nlm.nih.gov/pubmed/23897914
StudyA genome-wide association study (GWAS) for bronchopulmonary dysplasia.
Disease/TraitBronchopulmonary dysplasia
Initial sample117 African American newborn cases, 108 African American newborn controls, 448 Hispanic newborn cases, 460 Hispanic newborn controls, 74 Asian or Pacific Islander ancestry newborn cases, 93 Asian or Pacific Islander ancestry newborn controls, 174 European
Replication sample371 newborn cases, 424 newborn controls
Region11p13
Chromosome idchr11
Chromosome position35517721
Reported genePAMR1
Mapped genePAMR1
Upstream gene id
Downstream gene id
SNP gene ids25891
Upstream gene distance
Downstream gene distance
SNP risk allelers650950-G
SNPsrs650950
Merged0
SNP id current650950
Contextintron_variant
Intergenic0
Allele frequency0.29
P value0.000002
Pvalue mlog5.69897000433601
P value text(Hispanic)
Or beta1.55
%95 Ci[NR]
PlatformIllumina [1795103]
CNVN
Mapped traitBronchopulmonary dysplasia
Mapped trait URIhttp://www.orpha.net/ORDO/Orphanet_70589
Study accessionGCST002104