Human SNP ID | rs6508367 |
---|---|
Human chromosome | chr18 |
Human SNP position | 25391893 |
Pig chromosome | chr6 |
Pig SNP position | 103048263 |
PubMed ID | 25343990 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25343990 |
Study | Genome-wide association study of selenium concentrations. |
Disease/Trait | Toenail selenium levels |
Initial sample | 4,162 European ancestry individuals |
Replication sample | NA |
Region | 18q11.2 |
Chromosome id | chr18 |
Chromosome position | 25391893 |
Reported gene | ZNF521, SS18 |
Mapped gene | ZNF521 - LOC105372033 |
Upstream gene id | 25925 |
Downstream gene id | 105372033 |
SNP gene ids | |
Upstream gene distance | 39643 |
Downstream gene distance | 566091 |
SNP risk allele | rs6508367-T |
SNPs | rs6508367 |
Merged | 0 |
SNP id current | 6508367 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.96 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 0.04 |
%95 Ci | [0.022-0.058] unit decrease |
Platform | Affymetrix, Illumina [2378986] (imputed) |
CNV | N |
Mapped trait | selenium measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006331 |
Study accession | GCST002671 |