SNP Detail For rs6504218
1.Mapping Information
Human SNP ID rs6504218
Human chromosome chr17
Human SNP position 64330939
Pig chromosome chr12
Pig SNP position 14710461
2.Annotation Information
PubMed ID21378988
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21378988
StudyA genome-wide association study in Europeans and South Asians identifies five new loci for coronary artery disease.
Disease/TraitCoronary heart disease
Initial sample8,424 European ancestry cases, 7,268 European ancestry controls, 6,996 South Asian ancestry cases, 7,794 South Asian ancestry controls
Replication sample18,049 European ancestry cases, 16,357 European ancestry controls, 3,359 South Asian ancestry cases, 2,828 South Asian ancestry controls
Region17q23.3
Chromosome idchr17
Chromosome position64330939
Reported geneintergenic
Mapped genePECAM1
Upstream gene id
Downstream gene id
SNP gene ids5175
Upstream gene distance
Downstream gene distance
SNP risk allelers6504218-?
SNPsrs6504218
Merged0
SNP id current6504218
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta
%95 Ci
PlatformIllumina [574919]
CNVN
Mapped traitcoronary heart disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001645
Study accessionGCST000999