Human SNP ID | rs6495785 |
---|---|
Human chromosome | chr15 |
Human SNP position | 35566382 |
Pig chromosome | chr1 |
Pig SNP position | 151553181 |
PubMed ID | 24045676 |
---|---|
Journal | Menopause |
Link | www.ncbi.nlm.nih.gov/pubmed/24045676 |
Study | Genome-wide association studies and epistasis analyses of candidate genes related to age at menarche and age at natural menopause in a Korean population. |
Disease/Trait | Menopause (age at onset) |
Initial sample | 1,827 Korean ancestry females |
Replication sample | NA |
Region | 15q14 |
Chromosome id | chr15 |
Chromosome position | 35566382 |
Reported gene | AS1, ATPBD4 |
Mapped gene | DPH6-AS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100507466 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6495785-A |
SNPs | rs6495785 |
Merged | 0 |
SNP id current | 6495785 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.787 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | 0.69 |
%95 Ci | [0.40-0.98] unit decrease |
Platform | Affymetrix [343107] |
CNV | N |
Mapped trait | age at menopause |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004704 |
Study accession | GCST002192 |