SNP Detail For rs6494849
1.Mapping Information
Human SNP ID rs6494849
Human chromosome chr15
Human SNP position 70188275
Pig chromosome chr1
Pig SNP position 186143617
2.Annotation Information
PubMed ID19416921
JournalProc Natl Acad Sci U S A
Linkwww.ncbi.nlm.nih.gov/pubmed/19416921
StudyGenome-wide association and meta-analysis of bipolar disorder in individuals of European ancestry.
Disease/TraitBipolar disorder
Initial sample3,683 European ancestry cases, 14,507 European ancestry controls
Replication sampleNA
Region15q23
Chromosome idchr15
Chromosome position70188275
Reported geneNR
Mapped geneTLE3 - LOC105370878
Upstream gene id7090
Downstream gene id105370878
SNP gene ids
Upstream gene distance90340
Downstream gene distance107969
SNP risk allelers6494849-A
SNPsrs6494849
Merged0
SNP id current6494849
Contextupstream_gene_variant
Intergenic1
Allele frequency0.12
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta1.23
%95 Ci[1.13-1.35]
PlatformAffymetrix, Illumina [2366197] (imputed)
CNVN
Mapped traitbipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST000387