Human SNP ID | rs6488619 |
---|---|
Human chromosome | chr12 |
Human SNP position | 13774962 |
Pig chromosome | chr5 |
Pig SNP position | 62050895 |
PubMed ID | 22116950 |
---|---|
Journal | Hum Reprod |
Link | www.ncbi.nlm.nih.gov/pubmed/22116950 |
Study | Genetic variants and environmental factors associated with hormonal markers of ovarian reserve in Caucasian and African American women. |
Disease/Trait | Ovarian reserve |
Initial sample | 232 European ancestry female individuals, 200 African American female individuals |
Replication sample | NA |
Region | 12p13.1 |
Chromosome id | chr12 |
Chromosome position | 13774962 |
Reported gene | GRIN2B |
Mapped gene | GRIN2B |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2904 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6488619-? |
SNPs | rs6488619 |
Merged | 0 |
SNP id current | 6488619 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.0000009 |
Pvalue mlog | 6.04575749056067 |
P value text | (FSH levels - EA) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [677261] |
CNV | N |
Mapped trait | ovarian reserve |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004770 |
Study accession | GCST001330 |