SNP Detail For rs6486986
1.Mapping Information
Human SNP ID rs6486986
Human chromosome chr12
Human SNP position 19648661
Pig chromosome chr5
Pig SNP position 56774337
2.Annotation Information
PubMed ID19734545
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19734545
StudyA genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
Disease/TraitCognitive performance
Initial sampleUp to 1,295 individuals
Replication sampleNA
Region12p12.3
Chromosome idchr12
Chromosome position19648661
Reported geneAC090059.9
Mapped geneLOC101928387
Upstream gene id
Downstream gene id
SNP gene ids101928387
Upstream gene distance
Downstream gene distance
SNP risk allelers6486986-?
SNPsrs6486986
Merged0
SNP id current6486986
Contextintron_variant
Intergenic0
Allele frequency0.2253
P value0.000008
Pvalue mlog5.09691001300805
P value text(SWM strategy)
Or beta
%95 Ci
PlatformIllumina [475971]
CNVN
Mapped traitneuropsychological test
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003926
Study accessionGCST000477