SNP Detail For rs6482992
1.Mapping Information
Human SNP ID rs6482992
Human chromosome chr10
Human SNP position 127880410
Pig chromosome chr14
Pig SNP position 148979544
2.Annotation Information
PubMed ID22658654
JournalParkinsonism Relat Disord
Linkwww.ncbi.nlm.nih.gov/pubmed/22658654
StudyGenomic determinants of motor and cognitive outcomes in Parkinson__s disease.
Disease/TraitParkinson__s disease (motor and cognition)
Initial sample443 European ancestry cases
Replication sampleNA
Region10q26.2
Chromosome idchr10
Chromosome position127880410
Reported geneCLRN3
Mapped geneCLRN3
Upstream gene id
Downstream gene id
SNP gene ids119467
Upstream gene distance
Downstream gene distance
SNP risk allelers6482992-?
SNPsrs6482992
Merged0
SNP id current6482992
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text(congnitive outcome)
Or beta2.03
%95 Ci[1.47-2.79]
PlatformNR [198345]
CNVN
Mapped traitParkinson__s disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002508
Study accessionGCST001546