SNP Detail For rs6478282
1.Mapping Information
Human SNP ID rs6478282
Human chromosome chr9
Human SNP position 117162816
Pig chromosome chr1
Pig SNP position 289058253
2.Annotation Information
PubMed ID22658931
JournalVaccine
Linkwww.ncbi.nlm.nih.gov/pubmed/22658931
StudyA genome-wide association study of host genetic determinants of the antibody response to Anthrax Vaccine Adsorbed.
Disease/TraitImmune response to anthrax vaccine
Initial sample726 European ancestry individuals
Replication sampleNA
Region9q33.1
Chromosome idchr9
Chromosome position117162816
Reported geneASTN2
Mapped geneASTN2
Upstream gene id
Downstream gene id
SNP gene ids23245
Upstream gene distance
Downstream gene distance
SNP risk allelers6478282-A
SNPsrs6478282
Merged0
SNP id current6478282
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta0.101
%95 Ci[0.058-0.144] unit increase
PlatformAffymetrix [736996]
CNVN
Mapped traitresponse to vaccine
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645
Study accessionGCST001547