SNP Detail For rs6468442
1.Mapping Information
Human SNP ID rs6468442
Human chromosome chr8
Human SNP position 37829231
Pig chromosome chr15
Pig SNP position 55702235
2.Annotation Information
PubMed ID19448619
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19448619
StudyLoci at chromosomes 13, 19 and 20 influence age at natural menopause.
Disease/TraitMenopause (age at onset)
Initial sample2,979 European ancestry female individuals
Replication sample2,560 European ancestry female individuals
Region8p11.23
Chromosome idchr8
Chromosome position37829231
Reported geneNR
Mapped geneADGRA2
Upstream gene id
Downstream gene id
SNP gene ids25960
Upstream gene distance
Downstream gene distance
SNP risk allelers6468442-?
SNPsrs6468442
Merged0
SNP id current6468442
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000003
Pvalue mlog6.52287874528033
P value text
Or beta0.39
%95 Ci[0.24-0.54] years decrease
PlatformIllumina [315418]
CNVN
Mapped traitage at menopause
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004704
Study accessionGCST000401