SNP Detail For rs6464816
1.Mapping Information
Human SNP ID rs6464816
Human chromosome chr7
Human SNP position 147529799
Pig chromosome chr9
Pig SNP position 121512523
2.Annotation Information
PubMed ID22589738
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/22589738
StudyGenome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.
Disease/TraitVisceral adipose tissue/subcutaneous adipose tissue ratio
Initial sample5,560 European ancestry female individuals, 4,997 European ancestry male individuals
Replication sampleNA
Region7q35
Chromosome idchr7
Chromosome position147529799
Reported geneCNTNAP2
Mapped geneCNTNAP2
Upstream gene id
Downstream gene id
SNP gene ids26047
Upstream gene distance
Downstream gene distance
SNP risk allelers6464816-A
SNPsrs6464816
Merged0
SNP id current6464816
Contextintron_variant
Intergenic0
Allele frequency0.15
P value0.000009
Pvalue mlog5.04575749056067
P value text(men)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traitvisceral:subcutaneous adipose tissue ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004767
Study accessionGCST001524