Human SNP ID | rs6458016 |
---|---|
Human chromosome | chr6 |
Human SNP position | 37730827 |
Pig chromosome | chr7 |
Pig SNP position | 38202340 |
PubMed ID | 25865494 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25865494 |
Study | Genome-wide Analysis of Body Proportion Classifies Height-Associated Variants by Mechanism of Action and Implicates Genes Important for Skeletal Development. |
Disease/Trait | Sitting height ratio |
Initial sample | 3,545 African Americans individuals, 12,965 European ancestry women, 8,625 European ancestry men |
Replication sample | NA |
Region | 6p21.2 |
Chromosome id | chr6 |
Chromosome position | 37730827 |
Reported gene | NR |
Mapped gene | MDGA1 - ZFAND3 |
Upstream gene id | 266727 |
Downstream gene id | 60685 |
SNP gene ids | |
Upstream gene distance | 32837 |
Downstream gene distance | 88669 |
SNP risk allele | rs6458016-T |
SNPs | rs6458016 |
Merged | 0 |
SNP id current | 6458016 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.792 |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | (EA) |
Or beta | 0.062 |
%95 Ci | [0.038-0.086] unit increase |
Platform | Affymetrix, Illumina [up to 10250422] (imputed) |
CNV | N |
Mapped trait | sitting height ratio |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007118 |
Study accession | GCST002843 |