SNP Detail For rs6448317
1.Mapping Information
Human SNP ID rs6448317
Human chromosome chr4
Human SNP position 24947598
Pig chromosome chr8
Pig SNP position 19143883
2.Annotation Information
PubMed ID25130324
JournalGenes Brain Behav
Linkwww.ncbi.nlm.nih.gov/pubmed/25130324
StudyA genome-wide search for quantitative trait loci affecting the cortical surface area and thickness of Heschl__s gyrus.
Disease/TraitHeschl__s gyrus morphology
Initial sample1,778 European ancestry individuals, 1,276 individuals
Replication sampleNA
Region4p15.2
Chromosome idchr4
Chromosome position24947598
Reported geneCCDC149
Mapped geneCCDC149
Upstream gene id
Downstream gene id
SNP gene ids91050
Upstream gene distance
Downstream gene distance
SNP risk allelers6448317-T
SNPsrs6448317
Merged0
SNP id current6448317
Contextintron_variant
Intergenic0
Allele frequency0.19
P value0.000004
Pvalue mlog5.39794000867203
P value text(Right HG thickness)
Or beta0.0583
%95 Ciunit decrease
PlatformAffymetrix, Illumina [4103035] (imputed)
CNVN
Mapped traitHeschl__s gyrus morphology measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005852
Study accessionGCST002579