SNP Detail For rs6444305
1.Mapping Information
Human SNP ID rs6444305
Human chromosome chr3
Human SNP position 188582114
Pig chromosome JH118523-1
Pig SNP position 76377
2.Annotation Information
PubMed ID25279986
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25279986
StudyGenome-wide Association Study Identifies Five Susceptibility Loci for Follicular Lymphoma outside the HLA Region.
Disease/TraitFollicular lymphoma
Initial sample2,728 European ancestry cases, 7,758 European ancestry controls
Replication sample1,795 European ancestry cases, 5,586 European ancestry controls
Region3q28
Chromosome idchr3
Chromosome position188582114
Reported geneLPP
Mapped geneLPP
Upstream gene id
Downstream gene id
SNP gene ids4026
Upstream gene distance
Downstream gene distance
SNP risk allelers6444305-G
SNPsrs6444305
Merged0
SNP id current6444305
Contextintron_variant
Intergenic0
Allele frequency0.276
P value0.0000000001
Pvalue mlog10
P value text
Or beta1.21
%95 Ci[1.14-1.28]
PlatformIllumina [up to 21554489]
CNVN
Mapped traitneoplasm of mature B-cells
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000096
Study accessionGCST002643