SNP Detail For rs6437122
1.Mapping Information
Human SNP ID rs6437122
Human chromosome chr2
Human SNP position 157986506
Pig chromosome chr15
Pig SNP position 71861196
2.Annotation Information
PubMed ID25469926
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/25469926
StudyNovel loci associated with usual sleep duration: the CHARGE Consortium Genome-Wide Association Study.
Disease/TraitSleep duration
Initial sample47,180 European ancestry individuals
Replication sample4,771 African American individuals
Region2q24.1
Chromosome idchr2
Chromosome position157986506
Reported geneUPP2
Mapped geneLOC100130766 - UPP2
Upstream gene id100130766
Downstream gene id151531
SNP gene ids
Upstream gene distance23606
Downstream gene distance8673
SNP risk allelers6437122-?
SNPsrs6437122
Merged0
SNP id current6437122
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text(EA)
Or beta3.25
%95 Ci[1.84-4.66] unit decrease
PlatformAffymetrix, Illumina [2033301]
CNVN
Mapped traitsleep duration
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005271
Study accessionGCST002711