SNP Detail For rs6436839
1.Mapping Information
Human SNP ID rs6436839
Human chromosome chr2
Human SNP position 229105082
Pig chromosome chr15
Pig SNP position 144198486
2.Annotation Information
PubMed ID21107309
JournalNeuropsychopharmacology
Linkwww.ncbi.nlm.nih.gov/pubmed/21107309
StudyGenome-wide pharmacogenomic study of neurocognition as an indicator of antipsychotic treatment response in schizophrenia.
Disease/TraitResponse to antipsychotic treatment in schizophrenia (reasoning)
Initial sample738 European ancestry, African American, and other ancestry cases
Replication sampleNA
Region2q36.3
Chromosome idchr2
Chromosome position229105082
Reported genePID1
Mapped genePID1
Upstream gene id
Downstream gene id
SNP gene ids55022
Upstream gene distance
Downstream gene distance
SNP risk allelers6436839-?
SNPsrs6436839
Merged0
SNP id current6436839
Contextintron_variant
Intergenic0
Allele frequency0.29
P value0.000003
Pvalue mlog5.52287874528033
P value text(quetiapine)
Or beta
%95 Ci
PlatformAffymetrix [492900]
CNVN
Mapped traitreasoning
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004350
Study accessionGCST000885